Debian Med Project
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Summary
Tools
Debian Med several tools

This metapackage will install tools for several purposes in health care. Currently it contains some simple programs for Personal Health.

The list to the right includes various software projects which are of some interest to the Debian Med Project. Currently, only a few of them are available as Debian packages. It is our goal, however, to include all software in Debian Med which can sensibly add to a high quality Debian Pure Blend.

For a better overview of the project's availability as a Debian package, each head row has a color code according to this scheme:

If you discover a project which looks like a good candidate for Debian Med to you, or if you have prepared an unofficial Debian package, please do not hesitate to send a description of that project to the Debian Med mailing list

Links to other tasks

Debian Med Tools packages

Official Debian packages with high relevance

Cronometer
CRON-o-Meter - Exercise and nutrient intake tracker
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Easy to use daily nutrient intake tracker that includes nutritional information on over 8000 foods. User can create, import and export custom foods and recipes as well as set personal targets for each nutrient. CRON-O-Meter can also track and chart your biometrics (weight, blood pressure, temperature, etc) and generate detailed reports on your nutritional intake.

Edfbrowser
viewer for biosignal storage files such as bdf and edf
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EDFbrowser is a viewer for medical timeseries storage files containing data such as EEG, EMG, and ECG signals. It supports EDF(+) and BDF(+) file formats. Apart from viewing the files, it also supports some editing operations and can convert the biomedical files to other formats.

Please cite: Martin Wolgast, Lars-Gunnar Lundh and Gardar Viborg: Cognitive reappraisal and acceptance: An experimental comparison of two emotion regulation strategies. Behaviour Research and Therapy 49(12):858–866 (2011)
Hunspell-de-med
German medical dictionary for hunspell
Maintainer: Tobias Quathamer
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This package contains a German medical dictionary for use with the hunspell spellchecker which is currently used within OpenOffice.org2 and as an ispell clone.

Hunspell-en-med
English medical dictionary for hunspell
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This package contains an English medical dictionary for use with the hunspell spell checker which is currently used by OpenOffice.org2

Nut-nutrition
dietary nutrition analysis software
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This software help you record what you eat and then analyzes your meals for nutrient levels in terms of the USDA "Daily Value" (the standard for food labeling in the US.

Pcalendar
Monitorowanie cykli miesiączkowych i przewidywanie okresów płodności
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Periodic Calendar (Kalendarz cykli miesiączkowych) jest aplikacją z graficznym interfejsem, która pomaga kobietom monitorować cykle menstruacyjne i przewidywać okresy płodności. Informacje te mogą być pomocne zarówno przy planowaniu poczęcia jak i zapobieganiu ciąży.

Periodic Calendar zapewnia obsługę metod: podstawowej temperatury ciała (ang. Basal Body Temperature - BBT) oraz objawowo-termicznej, które wykazują wysoką niezawodność w przewidywaniu okresów płodności. Użytkownik może wybrać dowolny podzbiór funkcji, jakie zostaną wykorzystane lub nawet przejść do ogólnie stosowanej metody kalendarzowej (bardzo zawodnej w przypadku wyłącznego stosowania).

Autorzy Periodic Calendar wciąż podkreślają, że nie jest on równoważnym zamiennikiem lekarzy i konsultantów do planowania okresów płodności. Przed użyciem tej aplikacji, należy skonsultować się z lekarzem lub przeczytać dobrą książkę na ten temat.

PRZEWIDYWANIA WYKONANE PRZEZ TEN PROGRAM NIGDY NIE POWINNY BYĆ UWAŻANE ZA KOŃCOWE. ZASTOSOWANE METODY NIE SĄ W 100% SKUTECZNE DLA WSZYSTKICH KOBIET.

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VersionURL
3.2.0-2http://screenshots.debian.net/screenshots/p/pcalendar/8842_large.png
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Pondus
Personalny menedżer wagi oparty na GTK+2
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Pondus umożliwia kontrolowanie masy ciała pacjenta i, opcjonalnie, procentowej zawartości tkanki tłuszczowej, mięśniowej oraz wody. Aplikacja jest prosta w obsłudze, lekka i szybka w działaniu. Dane mogą być wyświetlane w postaci wykresu, aby uzyskać szybki przegląd historii dotyczącej wagi ciała. To proste narzędzie do planowania wagi ciała pozwala zdefiniować pożądaną wagę i porównywać ją z rzeczywistymi pomiarami znajdującymi się na wykresie.

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Python-clips
Python module to interface the CLIPS expert system shell library
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CLIPS is an expert system shell / inference engine written by NASA (see Debian package clips).

pyclips are the Python bindings to that engine.

Python-fitbit
FitBit REST API Client Implementation
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A Python module containing an implementation of a client for the FitBit REST API. It uses OAuth for authentication, it supports both US and SI units.

Quitcount
Small tool which may help yourself quit smoking
Maintainer: Ricardo Mones
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QuitCount is a simple counter that shows what you spared since you quit smoking. Once you tell it the date you quit, how much you smoked, and how much it cost, it'll tell you how many cigarettes you didn't smoke since, and how much it makes in terms of money, tar, and life expectancy.

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Wgerman-medical
German medical dictionary words for /usr/share/dict
Maintainer: Tobias Quathamer
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This package provides the file /usr/share/dict/german-medical containing a list of German medical words. This list can be used by spelling checkers, and by programs such as look(1).

Workrave
Repetitive Strain Injury prevention tool
Maintainer: Francois Marier
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Workrave is a program that assists in the recovery and prevention of Repetitive Strain Injury (RSI). The program frequently alerts you to take micro-pauses, rest breaks and restricts you to your daily limit.

It includes a system tray applet that works with GNOME and KDE and has network capabilities to monitor your activity even if switching back and forth between different computers is part of your job.

Workrave offers many more configuration options than other similar tools.

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Official Debian packages with lower relevance

Cycle
Kalendarz dla kobiet
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Cycle jest kalendarzem dla kobiet. Na podstawie podanej długości cyklu lub kilku okresów potrafi obliczyć pozostałą liczbę dni do menstruacji, wyznaczyć dni "bezpiecznego" seksu, okres płodny, liczbę dni do owulacji oraz określić dnień narodzin dziecka. Program pozwala użytkownikowi na tworzenie notatek i pomaga nadzorować gospodarkę hormonalną regulowaną tabletkami antykoncepcyjnymi.

Funkcje programu:

  • Określa, w które dni wystąpi menstruacja na podstawie długości cyklu lub statystyk wynikających z poprzednich okresów.
  • Określa dni "bezpiecznego" seksu, dni płodne oraz czas owulacji.
  • Wyznacza dnień narodzin dziecka.
  • Pozwala na tworzenie notatek.
  • Pomaga nadzorować przyjmowanie hormonalnych tabletek antykoncepcyjnych.
  • Umożliwia pracę wielu użytkownikom. Dane każdego użytkownika są chronione hasłem.

OSTRZEŻENIE: Program nie jest niezawodnym środkiem antykoncepcyjnym. Nie stanowi także ochrony przed chorobami wenerycznymi, takimi jak AIDS. Jest to raczej sposób na gromadzenie danych medycznych w formie elektronicznej i ich przetwarzanie w celu wyciągnięcia wniosków na podstawie opracowanych statystyk. W żadnym wypadku ten program nie zastąpi ginekologa.

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Remark of Debian Med team: Use pcalendar instead

Please consider using pcalendar instead of cycle because cycle is outdated, not maintained any more and pcalendar simply overpasses it.

Entangle
Tethered Camera Control & Capture
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Entangle provides a graphical interface for "tethered shooting", aka taking photographs with a digital camera completely controlled from the computer.

Using Entangle is as easy as 1,2,3...

  • Connect camera
  • Launch Entangle
  • Shoot photos

With a sufficiently capable digital SLR camera Entangle allows:

  • Trigger the shutter from the computer
  • Live preview of scene before shooting
  • Automatic download and display of photos as they are shot
  • Control of all camera settings from computer
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Goldencheetah
set of analysis tools for cycling performance
Maintainer: KURASHIKI Satoru
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GoldenCheetah is a software package that:

  • Downloads ride data directly from the CycleOps PowerTap and the SRM PowerControl V. Support for SRM PowerControl VI and VII is planned for the future.
  • Imports ride data downloaded with other programs, including TrainingPeaks WKO+ and the manufacturers' software for the Ergomo, Garmin, Polar, PowerTap, and SRM devices.
  • Provides a rich set of analysis tools, including a critical power graph, BikeScore calculation, histogram analysis, a best interval finder, and a pedal force versus pedal velocity chart, to name just a few.
Mencal
Kalendarz menstruacyjny
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Mencal jest kalendarzem menstruacyjnym napisanym w Perlu.

Prosta odmiana znanego wszystkim uniksowego polecenia cal. Główna różnica polega na możliwości oznaczenia kolorem powtarzających się cyklicznie wydarzeń. Może być użyty do wygodnego śledzenia cyklu menstruacyjnego (bądź jakiegokolwiek innego).

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Remark of Debian Med team: Use pcalendar instead

Please consider using pcalendar instead of mencal because mencal is outdated, not maintained any more and pcalendar simply overpasses it.

Debian packages in contrib or non-free

Mssstest
Normalisation of disease scores for patients with Multiple Sclerosis
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MSSStest is a program for implementing the method described in the article The Multiple Sclerosis Severity Score. R. Roxburgh S. Seaman et al. (2004), accepted for publication by Neurology. It calculates MSSS scores and uses these scores to test for differences between disease progression rates in different groups defined by genotype at some locus. A brief description of the method is given below.

Please cite: R H S R Roxburgh, S R Seaman, T Masterman, A E Hensiek, S J Sawcer, S Vukusic, I Achiti, C Confavreux, M Coustans, E le Page, G Edan, G V McDonnell, S Hawkins, M Trojano, M Liguori, E Cocco, M G Marrosu, F Tesser, M A Leone, A Weber, F Zipp, B Miterski, J T Epplen, A Oturai, P Soelberg Sorensen, E G Celius, N Tellez Lara, X Montalban, P Villoslada, A M Silva, M Marta, I Leite, B Dubois, J Rubio, H Butzkueven, T Kilpatrick, M P Mycko, K W Selmaj, M E Rio, M Sa, G Salemi, G Savettieri, J Hillert and D A S Compston: Multiple Sclerosis Severity Score: using disability and disease duration to rate disease severity. (PubMed,eprint) Neurology 64(7):1144-51 (2005)
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