|
920282 |
abyss fails to build on hurd - googletest EXPECT_DEATH |
|
|
1066334 |
acedb: FTBFS: acein.c:2045:15: error: implicit declaration of function âadd_historyâ [-Werror=implicit-function-declaration] |
ftbfs, help, sid, trixie |
|
1096281 |
aegean: ftbfs with GCC-15 |
forky, sid |
|
1067631 |
src:altree: autopkgtest timeouts on armel, armhf and ppc64el |
|
1096300 |
altree: ftbfs with GCC-15 |
forky, sid |
|
1096305 |
ampliconnoise: ftbfs with GCC-15 |
forky, sid |
|
1012893 |
anfo: ftbfs with GCC-12 |
bookworm, ftbfs, help, sid, trixie |
1061888 |
anfo: NMU diff for 64-bit time_t transition |
patch |
|
1098530 |
ariba: FTBFS: TestAssembly.test_assemble_with_spades fails |
ftbfs, sid, trixie |
|
1094842 |
augur: Please update to latest upstream 28.0.0, released 2025-01-30 |
|
|
1096345 |
augustus: ftbfs with GCC-15 |
forky, sid |
|
1040385 |
libball1.5-data: broken symlink: /usr/share/BALL-1.5/BALLView/html -> ../../doc/libball1.5-data/BALLView/html |
|
1060741 |
ball: Please port from sip4 to sip6 |
help |
|
865130 |
reapr FTBFS on big endian: Error sampling from files '00.Sample/fragCov.gz', '00.assembly.fa.gc.gz' |
ftbfs, upstream |
|
1043686 |
beads: Fails to build source after successful build |
ftbfs, sid, trixie |
1096362 |
beads: ftbfs with GCC-15 |
forky, sid |
|
1032034 |
beagle: broken package on non arm64/amd64 architectures |
wontfix |
|
1025830 |
beauti2 fails to start |
help |
|
1025424 |
beast-mcmc: please enable autopkgtest |
help |
|
1096367 |
bifrost: ftbfs with GCC-15 |
forky, sid |
|
1096372 |
biobambam2: ftbfs with GCC-15 |
forky, sid |
|
1085363 |
bioxtasraw: Python SyntaxWarning |
|
|
1035121 |
bitseq: please add autopkgtests (to add coverage for python3-numpy) |
|
|
1022772 |
btllib: fails to build on 32-bit archs |
wontfix |
1032358 |
btllib: Depends on libsdsl-dev, breaking installability when not needed |
patch, pending |
1058455 |
btllib: add build support for loongarch64 |
patch |
|
1032036 |
chromhmm: broken package on non arm64/amd64 architectures |
wontfix |
|
1096450 |
coils: ftbfs with GCC-15 |
forky, sid |
|
1072286 |
coot: add autopkgtest for coot executable |
patch |
1072618 |
coot: layla fails to start unless LD_LIBRARY_PATH is specified |
fixed-upstream |
|
1035182 |
cutesv: please add autopkgtests (to add coverage for python3-numpy) |
|
|
982869 |
datamash FTBFS on !x86 32bit: FAIL: tests/decorate-errors |
ftbfs, upstream |
1044977 |
datamash: Fails to build source after successful build |
ftbfs, sid, trixie |
1057439 |
datamash: "antimode" returns lowest, instead of least common, value |
|
1096504 |
datamash: ftbfs with GCC-15 |
forky, sid |
|
903886 |
dawg: Test suite fails |
upstream |
|
1096554 |
dwgsim: ftbfs with GCC-15 |
forky, sid |
|
862118 |
ea-utils: New upstream version available |
|
|
682042 |
emboss-data: ships bulky taxonomy and gene ontology data |
|
986043 |
emboss: uses media types that are not registered |
|
1069098 |
emboss: all executables segfault on s390x |
bookworm, bullseye, sid, trixie |
1069142 |
emboss: build time testsuite is failing silently |
|
1096578 |
emboss: ftbfs with GCC-15 |
forky, sid |
|
1088492 |
python3-emperor-doc: move from twitter-bootstrap{3,4} to bootstrap-html (v5) |
upstream |
|
1087184 |
examl: fails to run with tight cores count |
|
|
1096607 |
fasta3: ftbfs with GCC-15 |
forky, sid |
|
1096609 |
fastdnaml: ftbfs with GCC-15 |
forky, sid |
|
1096612 |
fastlink: ftbfs with GCC-15 |
forky, sid |
|
1096651 |
freecontact: ftbfs with GCC-15 |
forky, sid |
|
750139 |
gamgi: Conflicting return types of function gamgi_engine_iarray_push |
upstream |
967366 |
gamgi: depends on deprecated GTK 2 |
|
1044244 |
gamgi: Fails to build source after successful build |
ftbfs, sid, trixie |
|
715937 |
[Mayhem] Bug report on garlic: garlic crashes with exit status 139 |
|
749656 |
garlic: Conflicting declarations of function BlurMainWindow_ to cause undefined behaviour |
|
|
929564 |
gatb-core-testdata: broken symlink: /usr/share/doc/gatb-core/test/gatb-core-cppunit -> ../../../../lib/gatb-core/gatb-core-cppunit |
|
983926 |
gatb-core: ftbfs with -march=x86-64-v2 |
|
|
1039206 |
gbrowse: ships sysv-init script without systemd unit |
|
|
967379 |
gdpc: depends on deprecated GTK 2 |
wontfix |
982103 |
gdpc: autopkgtest failure on s390x |
|
|
1092841 |
genomicsdb: FTBFS with fmtlib 11.1 |
ftbfs |
|
732691 |
Pressing "alignment or Ctrl+G" only results in a dialog with a cancel button |
upstream |
|
967392 |
ghemical: depends on deprecated GTK 2 |
|
967865 |
ghemical: depends on deprecated libglade2 |
sid, trixie |
996006 |
ghemical: Segmentation fault when starting |
|
1066986 |
ghemical: FTBFS: /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/13/../../../x86_64-linux-gnu/libghemical.so: undefined reference to `sc::RenderedBallMolecule::RenderedBallMolecule(sc::Ref<sc::KeyVal> const&)' |
ftbfs, sid, trixie |
1089786 |
ghemical: uninstallable since transition to openmpi version 5 |
|
|
1096727 |
gmap: ftbfs with GCC-15 |
forky, sid |
|
644397 |
Provide runtime detection for CPU SIMD capabilities |
upstream |
983942 |
gromacs: ftbfs with -march=x86-64-v3 |
|
|
1098693 |
gubbins: autopkgtest regression in testing |
|
|
1053499 |
hilive: flaky autopkgtest on several archs: segfault |
upstream |
|
958244 |
Use system libinih-dev |
|
986193 |
hinge: no autopkgtest available yet |
newcomer |
1035178 |
hinge: please add autopkgtests (to add coverage for python3-numpy) |
|
1036500 |
hinge: please add autopkgtests (to add coverage for python3-matplotlib) |
|
|
1048028 |
hisat2: Fails to build source after successful build |
ftbfs, sid, trixie |
1076524 |
hisat2: autopkgtest uses absurd amount of memory on s390x |
|
|
1096850 |
iqtree: ftbfs with GCC-15 |
forky, sid |
|
1021557 |
jellyfish: Performance regression in 2.3.0 (orders of magnitude for some inputs) |
upstream |
|
875328 |
jellyfish1: FTBFS: __sync_val_compare_and_swap_8 undefined |
upstream, wontfix |
|
1095078 |
jmodeltest: reduce the permissions on /var/log/jmodeltest |
|
|
872418 |
jmol: Weblinks in Help do not work |
|
|
1047324 |
kallisto: Fails to build source after successful build |
ftbfs, sid, trixie |
1057131 |
kallisto: add support for loongarch64 in d/control |
patch, pending |
|
1081273 |
meryl: Meryl should be packaged separately from new upstream location |
|
|
1009159 |
kmerresistance: Add autopkgtest |
newcomer |
|
1048396 |
last-align: Fails to build source after successful build |
ftbfs, sid, trixie |
|
1097151 |
lastz: ftbfs with GCC-15 |
forky, sid |
|
1075199 |
libpwiz: ftbfs with GCC-14 |
ftbfs, sid, trixie |
|
967603 |
ltrsift: depends on deprecated GTK 2 |
upstream, wontfix |
1048669 |
ltrsift: Fails to build source after successful build |
ftbfs, sid, trixie |
|
1097321 |
lucy: ftbfs with GCC-15 |
forky, sid |
|
1047978 |
lumpy-sv: Fails to build source after successful build |
ftbfs, sid, trixie |
|
1097352 |
mafft: ftbfs with GCC-15 |
forky, sid |
|
1045227 |
massxpert: Fails to build source after successful build |
ftbfs, sid, trixie |
1084296 |
massxpert: FTBFS: rror: static assertion failed: No Q_OBJECT in the class passed to QObject::findChildren |
ftbfs, sid, trixie |
|
1097365 |
massxpert2: ftbfs with GCC-15 |
forky, sid |
|
1088028 |
megahit: consider unembedding parallel-hashmap |
|
|
1048833 |
melting: Fails to build source after successful build |
ftbfs, sid, trixie |
|
1035175 |
metaphlan: please add autopkgtests (to add coverage for python3-numpy) |
|
|
1035188 |
microbegps: please add autopkgtests (to add coverage for python3-numpy) |
|
|
1097402 |
minexpert2: ftbfs with GCC-15 |
forky, sid |
|
1066525 |
mlv-smile: FTBFS: src/allocateurs.c:45:39: error: implicit declaration of function âgetpagesizeâ [-Werror=implicit-function-declaration] |
ftbfs, pending, sid, trixie |
|
1088472 |
multiqc: move from twitter-bootstrap{3,4} to bootstrap-html (v5) |
upstream |
|
1097430 |
nanopolish: ftbfs with GCC-15 |
forky, sid |
|
956850 |
ncbi-blast+: Please provide /usr/bin/legacy_blast.pl |
|
984871 |
ncbi-blast+: Missing headers for shared libraries |
|
1010110 |
ncbi-blast+: terminate called after throwing an instance of 'ncbi::CIO_Exception' |
wontfix |
1077777 |
ncbi-blast+: makeblastdb yields broken DBs on s390x (BE generally?) |
upstream |
1080479 |
ncbi-blast+: failure to create blastdb v5 on riscv64 |
|
1097434 |
ncbi-blast+: ftbfs with GCC-15 |
forky, sid |
|
1048966 |
ncbi-igblast: Fails to build source after successful build |
ftbfs, sid, trixie |
1068442 |
igblast: Package igblast does not contain binary for igblast |
help |
1097435 |
ncbi-igblast: ftbfs with GCC-15 |
forky, sid |
|
1097436 |
ncbi-seg: ftbfs with GCC-15 |
forky, sid |
|
225651 |
ncbi-tools-x11: want Cn3D++ |
|
|
1049529 |
norsnet: Fails to build binary packages again after successful build |
ftbfs, sid, trixie |
|
1025370 |
ntcard: ftbfs with nthash 2.3.0 |
ftbfs, upstream |
|
1047870 |
obitools: Fails to build source after successful build |
ftbfs, sid, trixie |
|
1068052 |
openms: FTBFS on armel,armhf (error: âQOpenGLFunctions_2_0â does not name a type) |
ftbfs |
|
1097542 |
paml: ftbfs with GCC-15 |
forky, sid |
|
1069488 |
parsinsert: FTBFS on armhf: make[1]: *** [debian/rules:30: override_dh_auto_test] Error 1 |
confirmed, ftbfs, sid, trixie |
|
1091721 |
pbsuite: autopkgtest regression in testing |
confirmed |
|
1097575 |
phast: ftbfs with GCC-15 |
forky, sid |
|
1047303 |
plast: Fails to build source after successful build |
ftbfs, sid, trixie |
1097619 |
plast: ftbfs with GCC-15 |
forky, sid |
|
1097626 |
poa: ftbfs with GCC-15 |
forky, sid |
|
1074546 |
FTBFS with OCaml 5.2.0 (Uses C functions without caml_ prefix) |
ftbfs |
1093109 |
pplacer: FTBFS with OCaml 5.3.0 (error in C stubs) |
ftbfs |
|
1078584 |
prime-phylo fails to build with mpi-defaults 1.17 on armhf |
wontfix |
1097647 |
prime-phylo: ftbfs with GCC-15 |
forky, sid |
|
1097649 |
primer3: ftbfs with GCC-15 |
forky, sid |
|
1091575 |
probabel: FTBFS on i386: dh_auto_test: error: make -j8 check "TESTSUITEFLAGS=-j8 --verbose" VERBOSE=1 returned exit code 2 |
ftbfs, sid, trixie |
|
1042769 |
provean: incompatible with cd-hit >= 4.8.1-4 |
sid, trixie |
|
1048520 |
psortb: Fails to build source after successful build |
ftbfs, sid, trixie |
|
709306 |
pymol: Crashes when running within xrdp/vnc (no 3D support) |
|
765794 |
Race condition when running scripts in "stdin" mode |
|
783653 |
pymol: Segmentation fault immediately after loading pdb |
|
|
1058479 |
python-cogent: please (temporarily) drop python3-numba dependencies |
wontfix |
1090269 |
python-cogent: FTBFS: E ImportError: Numba could not be imported. |
ftbfs |
|
1085900 |
python-csb: Python SyntaxWarning |
pending |
|
1098613 |
python-sqt: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 3.13" returned exit code 13 |
ftbfs, sid, trixie |
|
1036374 |
[INTL:es] Spanish translation of qcumber debconf template |
l10n, patch |
1036506 |
qcumber: please add autopkgtests (to add coverage for python3-matplotlib) |
|
1049117 |
qcumber: Fails to build source after successful build |
ftbfs, sid, trixie |
1068856 |
[INTL:sv] Swedish strings for qcumber debconf |
l10n, patch |
1088515 |
qcumber: move from twitter-bootstrap{3,4} to bootstrap-html (v5) |
upstream |
|
1076314 |
qiime hard-codes python 3.11 without depending on it |
pending, sid, trixie |
1084668 |
qiime: removal of Python standard libraries in Python 3.13 |
fixed-upstream, pending |
|
642084 |
qutemol: Cannot start the program |
|
939033 |
qutemol: Uses GifQuantizeBuffer - stops working with newer giflib |
|
|
1097767 |
racon: ftbfs with GCC-15 |
forky, sid |
|
1047092 |
rambo-k: Fails to build source after successful build |
ftbfs, pending, sid, trixie |
|
909766 |
Use Debian packaged spdlog instead of code copy of old version |
help, upstream |
976588 |
rapmap: FTBFS on arm64 (when trying to build arch:all) |
bookworm, bullseye, ftbfs, sid, trixie |
1097770 |
rapmap: ftbfs with GCC-15 |
forky, sid |
|
1097771 |
rasmol: ftbfs with GCC-15 |
forky, sid |
|
1097773 |
raster3d: ftbfs with GCC-15 |
forky, sid |
|
1097774 |
raxml: ftbfs with GCC-15 |
forky, sid |
|
1097762 |
r-bioc-cner: ftbfs with GCC-15 |
forky, sid |
|
1085689 |
r-bioc-mofa: Python SyntaxWarning |
|
|
1097765 |
r-bioc-rtracklayer: ftbfs with GCC-15 |
forky, sid |
|
1081161 |
r-cran-sdmtools: removed from CRAN repository |
|
|
1084108 |
r-cran-spp: removed from CRAN repository |
|
|
1081175 |
r-cran-tcr: removed from CRAN repository |
|
|
1097779 |
readseq: ftbfs with GCC-15 |
forky, sid |
|
1097784 |
relion: ftbfs with GCC-15 |
forky, sid |
|
1097803 |
roguenarok: ftbfs with GCC-15 |
forky, sid |
|
1088027 |
salmon: consider unembedding parallel-hashmap |
|
1097838 |
salmon: ftbfs with GCC-15 |
forky, sid |
|
1015654 |
sambamba: ftbfs with LTO (link time optimization) enabled |
sid, trixie |
1095434 |
sambamba: rare segmentation fault makes nanosv autopkgtest flaky |
|
|
917851 |
seqan2 2.4.0+dfsg-9: FTBFS, alignment problem |
ftbfs |
1047218 |
seqan2: Fails to build source after successful build |
ftbfs, sid, trixie |
|
1049489 |
seqprep: Fails to build binary packages again after successful build |
ftbfs, sid, trixie |
|
967743 |
seqtools: depends on deprecated GTK 2 |
|
1047310 |
seqtools: Fails to build source after successful build |
ftbfs, sid, trixie |
|
1097885 |
sim4: ftbfs with GCC-15 |
forky, sid |
|
848589 |
snap-aligner: Build requires 188 GB of memory (fortunately not used, just allocated) |
|
|
1097906 |
soapaligner: ftbfs with GCC-15 |
forky, sid |
|
1097907 |
soapdenovo: ftbfs with GCC-15 |
forky, sid |
|
1097909 |
soapdenovo2: ftbfs with GCC-15 |
forky, sid |
|
1072346 |
sortmerna: please update autopkgtest |
newcomer |
1097910 |
sortmerna: ftbfs with GCC-15 |
forky, sid |
|
1086015 |
build for all supported python3 |
|
1088026 |
spades: consider unembedding parallel-hashmap |
|
1097913 |
spades: ftbfs with GCC-15 |
forky, sid |
|
1097922 |
spoa: ftbfs with GCC-15 |
forky, sid |
|
1084404 |
sra-sdk: move from fuse to fuse3 |
|
1087096 |
sra-sdk: Python SyntaxWarning |
patch, pending |
1097930 |
sra-sdk: ftbfs with GCC-15 |
forky, sid |
|
1097934 |
staden: ftbfs with GCC-15 |
forky, sid |
|
1048111 |
surankco: Fails to build source after successful build |
ftbfs, sid, trixie |
|
1097956 |
sweed: ftbfs with GCC-15 |
forky, sid |
|
956848 |
t-coffee: should use "example" blastpgp.pl |
|
|
1097993 |
thesias: ftbfs with GCC-15 |
forky, sid |
|
1098008 |
tnseq-transit: ftbfs with GCC-15 |
forky, sid |
|
1073358 |
toil: FTBFS: ModuleNotFoundError: No module named 'boto' |
ftbfs, sid, trixie |
1084681 |
toil: removal of Python standard libraries in Python 3.13 |
fixed-upstream, patch |
1087116 |
toil: Python SyntaxWarning |
patch, pending |
|
1098011 |
tracetuner: ftbfs with GCC-15 |
forky, sid |
|
846481 |
src:treeviewx: Please remove statically linked code copy of libncl |
|
|
981874 |
trinityrnaseq: flaky autopkgtest |
bookworm, bullseye, sid, trixie |
|
1047488 |
twopaco: Fails to build source after successful build |
ftbfs, sid, trixie |
|
1098031 |
ugene: ftbfs with GCC-15 |
forky, sid |
|
980509 |
umap-learn: Binary package name should be python3-umap-learn |
pending |
1058489 |
umap-learn: please (temporarily) drop python3-numba dependencies |
|
1071816 |
umap-learn: FTBFS: E TypeError: exceptions must be derived from Warning, not <class 'NoneType'> |
ftbfs |
|
1089115 |
umis: tracebacks normally fatal during autopkgtest runs |
upstream |
|
1098063 |
veryfasttree: ftbfs with GCC-15 |
forky, sid |
|
976511 |
vg: FTBFS on arm64: configure: error: Could not find a version of the library! |
bookworm, bullseye, ftbfs, sid, trixie |
987184 |
vg -- excessive variants built, and not tested |
|
1015699 |
vg: ftbfs with LTO (link time optimization) enabled |
sid, trixie |
1089275 |
vg: FTBFS with make 4.4.1 |
ftbfs, sid, trixie |
|
1098098 |
wise: ftbfs with GCC-15 |
forky, sid |