Summary

Bugs of task bio-phylogeny

Total bugs: 13

Open bugs: 7

Fixed bugs: 6

Links to other tasks

Tasks overview

Biology 287 (2555)

Biology development 134 (1144)

Next generation sequencing 7 (72)

Phylogeny 7 (54)

Cloud 47 (543)

Content management 0 (0)

Covid-19 178 (1743)

Medical data 2 (10)

Dental 2 (12)

Epidemiology 11 (102)

Hospital information systems 1 (9)

Imaging 197 (791)

Imaging development 78 (546)

Laboratory 1 (9)

Oncology 1 (3)

Pharmacology 1 (9)

Physics 27 (192)

Practice 8 (51)

Psychology 12 (136)

Rehabilitation 0 (0)

Research 0 (0)

Statistics 4 (16)

Tools 39 (240)

Typesetting 68 (534)

Legend

Severity	Dependent	Suggested
critical	0	0
grave	0	0
serious	1	0
important	1	0
normal	0	0
minor	3	0
wishlist	2	0

Summary bugs page of task Phylogeny

Looking into bugs of this task is recommended^*

Open bugs in dependent packages

1 serious, 1 important, 3 minor, 2 wishlist

altree (1) Homepage: https://gitlab.inria.fr/NGS/ALTree Vcs Debian Med Packaging Team
1067631	src:altree: autopkgtest timeouts on armel, armhf and ppc64el
beast-mcmc (2) Homepage: http://beast.bio.ed.ac.uk/ Vcs Debian Med Packaging Team
1025424	beast-mcmc: please enable autopkgtest	help
1043640	beast-mcmc: Fails to build source after successful build	ftbfs, sid, trixie
pplacer (1) Homepage: https://github.com/matsen/pplacer Vcs Debian Med Packaging Team
1074546	FTBFS with OCaml 5.2.0 (Uses C functions without caml_ prefix)	ftbfs
proalign (1) Homepage: http://loytynojalab.biocenter.helsinki.fi/software/proalign/ Vcs Debian Med Packaging Team
1046067	proalign: Fails to build source after successful build	ftbfs, sid, trixie
t-coffee (1) Homepage: https://www.tcoffee.org/Projects/tcoffee/index.html Vcs Debian Med Packaging Team
956848	t-coffee: should use "example" blastpgp.pl
treeviewx (1) Homepage: https://github.com/rdmpage/treeviewx Vcs Debian Med Packaging Team
846481	src:treeviewx: Please remove statically linked code copy of libncl

Open bugs in suggested packages

Done bugs

phyml (1) Homepage: http://www.atgc-montpellier.fr/phyml Vcs Debian Med Packaging Team
1086912	phyml: depends on openmpi on 32-bit architectures	sid, trixie
python-treetime (1) Homepage: https://github.com/neherlab/treetime Vcs Debian Med Packaging Team
1086965	python-treetime: Python SyntaxWarning
tree-puzzle (4) Homepage: http://www.tree-puzzle.de Vcs Debian Med Packaging Team
1049170	tree-puzzle: Fails to build source after successful build	ftbfs, sid, trixie
1082806	tree-puzzle: please make the build reproducible	patch
1086203	src:tree-puzzle: fails to migrate to testing for too long	sid, trixie
1086907	tree-puzzle: depends on openmpi on 32-bit architectures

^*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:

critical	10
grave	10
serious	10
important	5
normal	3
minor	1
wishlist	0