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Next generation sequencing - Quality Assurance

Summary

Autoremovals: 1

Migration issues: 1

CI failures: 5

Install issues: 1

No issues: 15/23

Debian Med bioinformatics applications usable in Next Generation Sequencing

It aims at gettting packages which specialize in the processing or interpretation of data generated with next- (and later-) generation high-thoughput sequencing technologies.

blasr

😟 Autoremoval

Package marked for automatic removal:

  • Will be removed on: 2025-10-04
  • Dependencies leading to autoremoval: pbcopper
  • Bugs in dependencies leading to autoremoval: #1097555

python-anndata

😟 CI

😟 Migration

Continuous integration (CI) tests are failing:

Migration from unstable to testing is blocked:

  • Not in testing for 578 days.
  • Verdict: Rejected/violates migration policy/introduces a regression
  • Reason: autopkgtest
  • Migrates after: python-awkward

bowtie

😟 CI

Continuous integration (CI) tests are failing:

daligner

😟 CI

Continuous integration (CI) tests are failing:

picard-tools

😟 CI

Continuous integration (CI) tests are failing:

sra-sdk

😟 CI

Continuous integration (CI) tests are failing:

libvcflib

😟 Install/upgrade

Piuparts failed:

mhap

😑 Tests missing

Continuous integration (CI) tests are missing.