Debian Med Project
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Summary
Pharmacology
Debian Med packages for pharmaceutical research

This metapackage contains dependencies for a collection of software and documentation which is useful for pharmaceutical research.

Description

For a better overview of the project's availability as a Debian package, each head row has a color code according to this scheme:

If you discover a project which looks like a good candidate for Debian Med to you, or if you have prepared an unofficial Debian package, please do not hesitate to send a description of that project to the Debian Med mailing list

Links to other tasks

Debian Med Pharmacology packages

Official Debian packages with high relevance

chemtool
program na kreslenie chemických štruktúr
Versions of package chemtool
ReleaseVersionArchitectures
sid1.6.14-6amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x
jessie1.6.14-1amd64,armel,armhf,i386
stretch1.6.14-1amd64,arm64,armel,armhf,i386,mips,mips64el,mipsel,ppc64el,s390x
buster1.6.14-3amd64,arm64,armhf,i386
bullseye1.6.14-6amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
bookworm1.6.14-6amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
trixie1.6.14-6amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x
Debtags of package chemtool:
fieldchemistry
interfacex11
roleprogram
scopeapplication
uitoolkitgtk
useediting, learning
works-withimage, image:vector
works-with-formatsvg
x11application
Popcon: 23 users (14 upd.)*
Versions and Archs
License: DFSG free
Git

Chemtool je editor chemických štruktúr pre X11 založený na GTK+. Podporuje mnohé štýly väzieb, väčšinu tvarov textu potrebných na písanie chemických textov a krivky/oblúky/zakrivené šípky.

Kresby možno exportovať do formátov MOL a PDB, SVG alebo XFig na ďalšie pridanie poznámok, ako kresbu PiCTeX, ako bitmapu alebo ako PostScriptový súbor (niekoľko z nich pomocou transfig - sprievodného programu fig2dev).

Balík tiež obsahuje pomocný program cht na výpočet sumárneho vzorca a (presnej) molekulárnej hmotnosti zo súboru kresby chemtool. Cht je možné volať buď priamo z Chemtool alebo z konzoly.

Please cite: Matthias Brüstle: Chemtool - Moleküle zeichnen mit dem Pinguin. (eprint) Nachr. Chem. 49(11):1310-1313 (2001)
Screenshots of package chemtool
r-cran-dosefinding
Planning and Analyzing Dose Finding experiments
Versions of package r-cran-dosefinding
ReleaseVersionArchitectures
jessie0.9-12-1amd64,armel,armhf,i386
stretch0.9-15-1amd64,arm64,armel,armhf,i386,mips,mips64el,mipsel,ppc64el,s390x
buster0.9-16-2amd64,arm64,armhf,i386
bullseye0.9-17-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
bookworm1.0-3-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
trixie1.2-1-1amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x
sid1.2-1-1amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x
Popcon: 4 users (4 upd.)*
Versions and Archs
License: DFSG free
Git

The DoseFinding GNU R package provides functions for the design and analysis of dose-finding experiments (with focus on pharmaceutical Phase II clinical trials). It provides functions for: multiple contrast tests, fitting non-linear dose-response models (using Bayesian and non-Bayesian estimation), calculating optimal designs and an implementation of the MCPMod methodology.

Please cite: Jose C. Pinheiro, Björn Bornkamp and Frank Bretz: Design and Analysis of Dose-Finding Studies Combining Multiple Comparisons and Modeling Procedures. (PubMed) Journal of Biopharmaceutical Statistics 16(5):639-656 (2006)
r-cran-rpact
Confirmatory Adaptive Clinical Trial Design and Analysis
Versions of package r-cran-rpact
ReleaseVersionArchitectures
buster1.0.0-1amd64,arm64,armhf,i386
bullseye3.0.3-2amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
bookworm3.3.4-1amd64,arm64,armel,armhf,i386,mips64el,mipsel,ppc64el,s390x
sid4.1.0-1amd64,arm64,armel,armhf,i386,mips64el,ppc64el,riscv64,s390x
Popcon: 2 users (2 upd.)*
Versions and Archs
License: DFSG free
Git

Design and analysis of confirmatory adaptive clinical trials with continuous, binary, and survival endpoints according to the methods described in the monograph by Wassmer and Brannath (2016). This includes classical group sequential as well as multi-stage adaptive hypotheses tests that are based on the combination testing principle.

*Popularitycontest results: number of people who use this package regularly (number of people who upgraded this package recently) out of 245498